Friday, September 9, 2016

Human DNA from Mosquitos?

So let me tell you all a little bit about me. I am a PhD Candidate at Sam Houston State University in the forensic science program. My concentration is in Forensic DNA and my research topic is human identification (HID) following mass disasters. However, I figured I should probably branch off to new topics, but first I thought I would start with an interesting read I found a little while ago titled, “Identification of person and quantification of human DNA recovered from mosquitoes (Culicidae)” by Garan Curic, et al. The article is a short communication about obtaining human DNA from the gut of mosquitoes. The study apparently stemmed from a case of a dead body found on the beach and the only evidence linking the victim to the suspect was a mosquito found at the suspect’s house that contained the blood of the victim. The use of human DNA from mosquitoes may sound weird. However, forensic science is all about the probative value of evidence. Any little piece of evidence is important if it can help tell the story of a crime committed, especially if it’s the only probative evidence found. I thought it would be a good article for those of you interested in forensic DNA because it touches on common DNA analyses for HID and a common problem that we face, such as DNA degradation.

Common DNA analysis in crime labs consists of (1) evidence collection and sampling, (2) DNA purification, (3) quantification, (4) amplification, and (5) short tandem repeat (STR) typing. The main criteria for successful STR typing is single source DNA of sufficient quantity and quality. Extracting human DNA from the gut of a mosquito could be an issue. We work with nanograms and picograms of DNA, and although that seems very small, degraded or low amounts of DNA makes STR typing more difficult. According to the article, the very little amount of human DNA in the gut of a mosquito is digested by digestive enzymes and bacterial activity. However, they were able to obtain full profiles up to 32-48 hours after feeding. Any time longer than that, they were only able to obtain partial DNA profiles. They were able to obtain more reportable alleles after reanalysis of these samples by increasing the number of cycles during amplification and using a mini-STR kit, which are common techniques used to overcome DNA degradation. I found it odd that they discussed DNA profiling before quantitation but anyway, the quantity of human DNA decreased as the digestion period increased. Low amounts of human DNA were reported (<1pg/uL in some cases). However, successful STR typing usually requires 500pg/uL to 1ng/uL of DNA. The solution is concentrating the purified DNA to obtain more DNA per microliter.

In conclusion, human DNA obtained from the gut of mosquitoes is suitable for STR typing more than three days after the feeding. I thought that was pretty interesting. It reminds me of another article that was able to obtain DNA from the worm in tequila. Look it up if you’re interested. Here’s a link to a brief description about it: http://www.scienceagogo.com/news/20100110033959data_trunc_sys.shtml. By the way, that’s sorta the basis of my research with Dr. Sheree Hughes-Stamm.

7 comments:

  1. I found the title of that article about DNA from the worm in alcohol. It's titled, "Direct PCR amplification and sequencing of specimens' DNA from preservative ethanol" by Shadi Shokralla, et al.

    ReplyDelete
  2. It is definitely interesting, but mildly terrifying, that DNA can live on in the gut of a mosquito for more than three days after it has fed. However, with the small amounts and the fact that the mosquito will most likely feed on many people in those three days, would that cause issues in finding a DNA match for a single person or would the purification process be able to differentiate between multiple DNA profiles?

    ReplyDelete
    Replies
    1. You're right. If the mosquito fed on multiple people within the three day period, it would be likely that you would get a mixed profile. That's a major topic of discussion in the forensic DNA community. Texas is being really pro-active about setting up standards in crime labs on how to interpret DNA mixtures, especially right now (https://www.texastribune.org/2015/09/12/new-crime-lab-protocol-forcing-review-dna-evidence/). As of now, there is no way to physically separate mixtures; only after the profile is obtained can you apply probabilities and statistics to determine if known individuals could have been a possible contributor or not.

      Delete
  3. I have heard of the major role that insects can play in forensic investigations, but I did not realize the evidential value that mosquitoes could hold. A mosquito could easily seem irrelevant and be overlooked. The case in which a mosquito was the only evidence to connect the victim and the suspect is a prime example of the meticulous nature of criminal investigations. When performing a search, anything present could be evidence.

    ReplyDelete
  4. Has there been any cases that have used DNA obtained from mosquitos to identify a suspect?

    ReplyDelete
    Replies
    1. When I was researching the topic further, I found an article that describes a case where a mosquito collected as evidence helped solve the crime. Here is the link to the article: http://www.sciencedirect.com.ezproxy.shsu.edu/science/article/pii/S0531513105016444

      Delete
  5. I'd be interested in learning about statistical methods for separating profiles from mixed DNA. It seems plausible to me if there are good reference profiles to work with...or alternatively, if there are a couple reference profiles, one might be able to take apart the remaining alleles and at least draw some conclusions (appropriately couched in the language of probability of course).

    ReplyDelete